Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Col1a1P11087 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Mir673-201ENSMUST00000102361 91 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm11488-201ENSMUST00000117277 863 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Gm11598-201ENSMUST00000119257 357 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm4540-201ENSMUST00000170669 429 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col1a1P11087 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm19196-201ENSMUST00000209258 357 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Gm7439-201ENSMUST00000214053 835 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Gm19073-201ENSMUST00000219978 555 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col1a1P11087 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.51□□□□□ -1.69
Col1a1P11087 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col1a1P11087 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm25860-201ENSMUST00000158252 126 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm26141-201ENSMUST00000175299 126 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col1a1P11087 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm29334-201ENSMUST00000190334 357 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm28655-201ENSMUST00000191538 692 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm43315-201ENSMUST00000198120 313 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm42428-201ENSMUST00000198677 302 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm43217-201ENSMUST00000199513 367 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Gm18944-201ENSMUST00000207672 643 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.5□□□□□ -1.69
Col1a1P11087 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Col1a1P11087 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col1a1P11087 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Col1a1P11087 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col1a1P11087 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col1a1P11087 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Col1a1P11087 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Col1a1P11087 Gm25376-201ENSMUST00000104340 133 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm12683-201ENSMUST00000117528 415 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm15994-201ENSMUST00000118029 402 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm14875-201ENSMUST00000120881 319 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm15022-201ENSMUST00000122074 746 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm24441-201ENSMUST00000157235 281 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm26556-201ENSMUST00000180645 320 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.49□□□□□ -1.69
Col1a1P11087 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col1a1P11087 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm45157-201ENSMUST00000208729 401 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm21007-201ENSMUST00000221024 326 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm3086-202ENSMUST00000221248 310 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col1a1P11087 Mir215-201ENSMUST00000083628 112 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Col1a1P11087 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col1a1P11087 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col1a1P11087 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col1a1P11087 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm12125-201ENSMUST00000117261 736 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm24244-201ENSMUST00000157317 130 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm24739-201ENSMUST00000158855 292 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm4479-201ENSMUST00000178807 171 ntBASIC4.49□□□□□ -1.69
Col1a1P11087 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.49□□□□□ -1.69
Col1a1P11087 Gm36776-201ENSMUST00000207006 203 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms