Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm26557-201ENSMUST00000180756 493 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Mir6244-201ENSMUST00000184156 117 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29227-201ENSMUST00000187139 315 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29034-201ENSMUST00000188099 315 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm9775-201ENSMUST00000189402 331 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29014-201ENSMUST00000191422 326 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm37129-201ENSMUST00000195791 315 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm19418-201ENSMUST00000197436 580 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm44348-201ENSMUST00000200165 122 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm45252-201ENSMUST00000211579 397 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm8672-201ENSMUST00000221200 332 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm24410-201ENSMUST00000083433 107 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm22581-201ENSMUST00000083735 136 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm22351-201ENSMUST00000083925 107 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Mir496a-201ENSMUST00000093627 79 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm43483-201ENSMUST00000196724 2860 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Dnm3os-201ENSMUST00000139662 7928 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm38381-201ENSMUST00000193594 2275 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 CT030185.1-201ENSMUST00000222940 2289 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm24069-201ENSMUST00000104512 127 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm15765-201ENSMUST00000118407 910 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm15181-201ENSMUST00000120142 177 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Trav20-201ENSMUST00000142754 347 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm22433-201ENSMUST00000158550 142 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm24546-201ENSMUST00000158652 102 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm24175-201ENSMUST00000158931 129 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm24713-201ENSMUST00000178850 107 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm25448-201ENSMUST00000180065 107 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm4842-201ENSMUST00000183237 835 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm27970-201ENSMUST00000184854 407 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm29062-201ENSMUST00000186032 694 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm28255-201ENSMUST00000187101 694 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm28973-201ENSMUST00000189310 613 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm37568-201ENSMUST00000191755 364 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm37128-201ENSMUST00000192599 232 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm38053-201ENSMUST00000193938 160 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm17954-201ENSMUST00000195893 607 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm8940-201ENSMUST00000212585 219 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm19790-201ENSMUST00000214414 251 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.03□□□□□ -1.6
Hoxd3P09027 CT485612.4-201ENSMUST00000223405 250 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm6436-201ENSMUST00000077163 451 ntBASIC5.03□□□□□ -1.6
Hoxd3P09027 Gm24695-201ENSMUST00000083877 83 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms