Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm44144-201ENSMUST00000203683 1960 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Mir208b-201ENSMUST00000104735 77 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm13772-201ENSMUST00000118431 317 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm15781-201ENSMUST00000120216 323 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm15618-201ENSMUST00000121610 452 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm12340-201ENSMUST00000121617 462 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm25348-201ENSMUST00000158961 111 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm25670-201ENSMUST00000178423 107 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm26335-201ENSMUST00000178449 107 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm26239-201ENSMUST00000178842 107 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm24267-201ENSMUST00000179841 107 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm27676-201ENSMUST00000183669 61 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm27602-201ENSMUST00000183861 111 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm28141-201ENSMUST00000186676 342 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm6501-201ENSMUST00000187178 916 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm29038-201ENSMUST00000191543 678 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm43541-201ENSMUST00000197208 581 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm43406-201ENSMUST00000200356 334 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm43105-201ENSMUST00000202987 459 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm2676-201ENSMUST00000207279 606 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm18703-201ENSMUST00000215318 333 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm19219-201ENSMUST00000215863 724 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 AV026068-237ENSMUST00000226075 572 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm22684-201ENSMUST00000082849 132 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm24292-201ENSMUST00000082888 107 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Pcdh1F7BJK1 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm22656-201ENSMUST00000104199 171 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm23839-201ENSMUST00000116957 109 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm15988-201ENSMUST00000118677 367 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm22867-201ENSMUST00000157499 109 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm26410-201ENSMUST00000157670 261 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm25412-201ENSMUST00000180258 107 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm29105-201ENSMUST00000187256 450 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm38050-201ENSMUST00000191904 238 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Mir6375-201ENSMUST00000197176 95 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm3148-201ENSMUST00000203594 612 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm44611-201ENSMUST00000207507 355 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm7786-201ENSMUST00000210494 436 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm7753-201ENSMUST00000221007 867 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm17890-201ENSMUST00000221419 757 ntBASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Pcdh1F7BJK1 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 120.8 ms