Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm42926-201ENSMUST00000200496 697 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm23297-201ENSMUST00000083184 127 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Olfr895-201ENSMUST00000093864 951 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm44530-201ENSMUST00000207920 3559 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm11600-201ENSMUST00000119592 240 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm22968-201ENSMUST00000157955 118 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm22859-201ENSMUST00000174978 122 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Trbv8-201ENSMUST00000194020 285 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm44475-201ENSMUST00000204041 424 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 AC133283.1-201ENSMUST00000228443 859 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 BC023105-201ENSMUST00000073997 1227 ntBASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Col4a6B1AVK5 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm24441-201ENSMUST00000157235 281 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm44355-201ENSMUST00000200417 104 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm25480-201ENSMUST00000083217 133 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Col4a6B1AVK5 Gm43665-201ENSMUST00000198672 1659 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 AC124586.1-201ENSMUST00000221673 2795 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm14861-201ENSMUST00000119451 455 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Mir7k-201ENSMUST00000184115 110 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm44690-201ENSMUST00000207984 382 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm23518-201ENSMUST00000082835 153 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Mir101b-201ENSMUST00000083622 97 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Col4a6B1AVK5 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm14240-201ENSMUST00000120353 546 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm24244-201ENSMUST00000157317 130 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm23121-201ENSMUST00000157653 173 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm3470-201ENSMUST00000160819 420 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.03□□□□□ -1.76
Col4a6B1AVK5 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms