Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm24147-201ENSMUST00000082763 144 ntBASIC4.29□□□□□ -1.72
Scn3aA2ASI5 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.29□□□□□ -1.72
Scn3aA2ASI5 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm6071-201ENSMUST00000119561 440 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm22514-201ENSMUST00000122547 308 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm23540-201ENSMUST00000157543 164 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm24550-201ENSMUST00000158648 279 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm38374-201ENSMUST00000194417 2033 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm45245-201ENSMUST00000210082 376 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm25480-201ENSMUST00000083217 133 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scn3aA2ASI5 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm14687-201ENSMUST00000120206 363 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm24244-201ENSMUST00000157317 130 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm22219-201ENSMUST00000157562 319 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm18953-201ENSMUST00000175694 300 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm28263-201ENSMUST00000185884 400 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm45498-201ENSMUST00000210346 283 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm26063-201ENSMUST00000083378 107 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Mir1934-201ENSMUST00000158127 83 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm24314-201ENSMUST00000158274 123 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm20693-201ENSMUST00000177431 211 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm26746-201ENSMUST00000181722 487 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm45420-201ENSMUST00000211243 425 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm45733-201ENSMUST00000212988 437 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Gm12582-201ENSMUST00000030555 697 ntBASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn3aA2ASI5 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Gm25727-201ENSMUST00000104522 131 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Mir7658-201ENSMUST00000184043 57 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Trbv8-201ENSMUST00000194020 285 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Gm7639-201ENSMUST00000212608 484 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 AC134864.1-201ENSMUST00000226326 511 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Scn3aA2ASI5 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm25977-201ENSMUST00000158697 85 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm27036-201ENSMUST00000182465 980 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm2314-201ENSMUST00000200391 586 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Gm5185-201ENSMUST00000080271 619 ntBASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Scn3aA2ASI5 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 116.4 ms