Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Gm6576-201ENSMUST00000169678 883 ntBASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.49■□□□□ 0.39
H2afb2S4R1M3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
H2afb2S4R1M3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
H2afb2S4R1M3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.47■□□□□ 0.39
H2afb2S4R1M3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2afb2S4R1M3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
H2afb2S4R1M3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
H2afb2S4R1M3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
H2afb2S4R1M3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2afb2S4R1M3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms