Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmg20bQ9Z104 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Hmg20bQ9Z104 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.6■□□□□ 0.89
Hmg20bQ9Z104 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Gm10517-202ENSMUST00000192970 758 ntBASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmg20bQ9Z104 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20bQ9Z104 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20bQ9Z104 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmg20bQ9Z104 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.58■□□□□ 0.89
Hmg20bQ9Z104 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Hmg20bQ9Z104 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Gm13168-201ENSMUST00000121771 632 ntBASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmg20bQ9Z104 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmg20bQ9Z104 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmg20bQ9Z104 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms