Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Gm13401-201ENSMUST00000117074 291 ntBASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cdh20Q9Z0M3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Gm37856-201ENSMUST00000191634 999 ntBASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdh20Q9Z0M3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Gm29257-201ENSMUST00000186115 639 ntBASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Gm18666-201ENSMUST00000190039 958 ntBASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Trmt13-210ENSMUST00000198454 880 ntBASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdh20Q9Z0M3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh20Q9Z0M3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cdh20Q9Z0M3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.14■□□□□ 0.17
Cdh20Q9Z0M3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Gm6576-201ENSMUST00000169678 883 ntBASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Gm18025-201ENSMUST00000221733 862 ntBASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cdh20Q9Z0M3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms