Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cx3cr1Q9Z0D9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cr1Q9Z0D9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cr1Q9Z0D9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cr1Q9Z0D9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cr1Q9Z0D9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cx3cr1Q9Z0D9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Gm45417-201ENSMUST00000209533 758 ntBASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cx3cr1Q9Z0D9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Gm13234-201ENSMUST00000120010 747 ntBASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cx3cr1Q9Z0D9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cx3cr1Q9Z0D9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cr1Q9Z0D9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms