Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clcn2Q9R0A1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clcn2Q9R0A1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clcn2Q9R0A1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Gm12896-201ENSMUST00000118430 226 ntBASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn2Q9R0A1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn2Q9R0A1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn2Q9R0A1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn2Q9R0A1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.81■□□□□ 0.44
Clcn2Q9R0A1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 269 ms