Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trem3Q9JKE1 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.15□□□□□ -0.15
Trem3Q9JKE1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trem3Q9JKE1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Gm10033-202ENSMUST00000211874 928 ntBASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Gm18671-201ENSMUST00000214826 683 ntBASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trem3Q9JKE1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.13□□□□□ -0.15
Trem3Q9JKE1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trem3Q9JKE1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trem3Q9JKE1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Gm29791-202ENSMUST00000207888 369 ntBASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trem3Q9JKE1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms