Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpf2Q9JJ80 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpf2Q9JJ80 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rpf2Q9JJ80 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Gm44549-201ENSMUST00000208351 577 ntBASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpf2Q9JJ80 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Gm13401-201ENSMUST00000117074 291 ntBASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Rpf2Q9JJ80 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm7290-201ENSMUST00000104990 617 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm12918-201ENSMUST00000120234 636 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm15710-201ENSMUST00000121821 636 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm6211-202ENSMUST00000167849 925 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm5075-201ENSMUST00000196916 622 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.56■□□□□ 0.56
Rpf2Q9JJ80 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpf2Q9JJ80 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Flg-201ENSMUST00000050758 1488 ntBASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Gm13216-201ENSMUST00000117145 591 ntBASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpf2Q9JJ80 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms