Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf13bQ9ET35 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf13bQ9ET35 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf13bQ9ET35 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf13bQ9ET35 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.76□□□□□ -0.21
Tnfrsf13bQ9ET35 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm42778-201ENSMUST00000199644 553 ntBASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.75□□□□□ -0.21
Tnfrsf13bQ9ET35 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm13216-201ENSMUST00000117145 591 ntBASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.74□□□□□ -0.21
Tnfrsf13bQ9ET35 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tnfrsf13bQ9ET35 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms