Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk4Q9ERK0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.26■□□□□ 0.99
Ripk4Q9ERK0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ripk4Q9ERK0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ripk4Q9ERK0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ripk4Q9ERK0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ripk4Q9ERK0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Gm45412-201ENSMUST00000210217 2275 ntBASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ripk4Q9ERK0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Gm6659-201ENSMUST00000174752 547 ntBASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Gm37194-201ENSMUST00000193092 3031 ntBASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ripk4Q9ERK0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Ripk4Q9ERK0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Gm38027-201ENSMUST00000192315 235 ntBASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ripk4Q9ERK0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ripk4Q9ERK0 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ripk4Q9ERK0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms