Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Nkx2-4Q9EQM3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Gm18195-201ENSMUST00000207604 706 ntBASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.91■□□□□ 0.46
Nkx2-4Q9EQM3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nkx2-4Q9EQM3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.89■□□□□ 0.46
Nkx2-4Q9EQM3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-4Q9EQM3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-4Q9EQM3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-4Q9EQM3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nkx2-4Q9EQM3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nkx2-4Q9EQM3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nkx2-4Q9EQM3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nkx2-4Q9EQM3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.86■□□□□ 0.45
Nkx2-4Q9EQM3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms