Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vmn1r40Q9EQ46 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vmn1r40Q9EQ46 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm10013-201ENSMUST00000106074 672 ntBASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm17661-201ENSMUST00000170317 270 ntBASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm18032-201ENSMUST00000222541 538 ntBASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.51■□□□□ 0.23
Vmn1r40Q9EQ46 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Vmn1r40Q9EQ46 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vmn1r40Q9EQ46 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Gm6659-201ENSMUST00000174752 547 ntBASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Gm18101-201ENSMUST00000215769 548 ntBASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vmn1r40Q9EQ46 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Iqck-206ENSMUST00000208658 2891 ntBASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vmn1r40Q9EQ46 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms