Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Gtf3c6Q9D8P7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Gtf3c6Q9D8P7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gtf3c6Q9D8P7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Gtf3c6Q9D8P7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gtf3c6Q9D8P7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.63■□□□□ 0.57
Gtf3c6Q9D8P7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gtf3c6Q9D8P7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gtf3c6Q9D8P7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gtf3c6Q9D8P7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Gtf3c6Q9D8P7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms