Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf225Q9D7D1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Gm37965-201ENSMUST00000195304 1362 ntBASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Gm18666-201ENSMUST00000190039 958 ntBASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf225Q9D7D1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf225Q9D7D1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.33■□□□□ 0.52
Rnf225Q9D7D1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf225Q9D7D1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf225Q9D7D1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf225Q9D7D1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf225Q9D7D1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf225Q9D7D1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms