Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Stag1Q9D3E6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.82■□□□□ 0.92
Stag1Q9D3E6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Stag1Q9D3E6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Stag1Q9D3E6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Gm33142-201ENSMUST00000193913 867 ntBASIC20.79■□□□□ 0.92
Stag1Q9D3E6 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Stag1Q9D3E6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Idnk-204ENSMUST00000226010 1898 ntBASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.78■□□□□ 0.92
Stag1Q9D3E6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Stag1Q9D3E6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Stag1Q9D3E6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Stag1Q9D3E6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stag1Q9D3E6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stag1Q9D3E6 Gm25016-201ENSMUST00000158399 131 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms