Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ndc80Q9D0F1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Mtag2-201ENSMUST00000058665 714 ntBASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ndc80Q9D0F1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ndc80Q9D0F1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Ndc80Q9D0F1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ndc80Q9D0F1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Gm10138-203ENSMUST00000206952 366 ntBASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ndc80Q9D0F1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Gm13158-201ENSMUST00000122007 736 ntBASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Mir2861-201ENSMUST00000175539 82 ntBASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ndc80Q9D0F1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ndc80Q9D0F1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms