Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hdhd3Q9CYW4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Gm13146-201ENSMUST00000118508 780 ntBASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Gm45417-201ENSMUST00000209533 758 ntBASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hdhd3Q9CYW4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Gm13534-201ENSMUST00000121169 513 ntBASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hdhd3Q9CYW4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hdhd3Q9CYW4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hdhd3Q9CYW4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms