Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ddx47Q9CWX9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx47Q9CWX9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx47Q9CWX9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx47Q9CWX9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx47Q9CWX9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.02■□□□□ 0.47
Ddx47Q9CWX9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx47Q9CWX9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ddx47Q9CWX9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx47Q9CWX9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx47Q9CWX9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx47Q9CWX9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms