Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ddx28Q9CWT6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Gm7290-201ENSMUST00000104990 617 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Gm12918-201ENSMUST00000120234 636 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Gm15710-201ENSMUST00000121821 636 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Gm5075-201ENSMUST00000196916 622 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx28Q9CWT6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx28Q9CWT6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx28Q9CWT6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx28Q9CWT6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Ddx28Q9CWT6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx28Q9CWT6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx28Q9CWT6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Gm29257-201ENSMUST00000186115 639 ntBASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Gm6365-201ENSMUST00000054711 744 ntBASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx28Q9CWT6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx28Q9CWT6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx28Q9CWT6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms