Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc43Q9CR29 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc43Q9CR29 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc43Q9CR29 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc43Q9CR29 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Gm38285-201ENSMUST00000192928 922 ntBASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc43Q9CR29 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc43Q9CR29 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc43Q9CR29 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Ccdc43Q9CR29 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Zfp783-201ENSMUST00000095946 670 ntBASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc43Q9CR29 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc43Q9CR29 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc43Q9CR29 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms