Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldnd1Q9CQX5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cldnd1Q9CQX5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Cldnd1Q9CQX5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cldnd1Q9CQX5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cldnd1Q9CQX5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Gm15794-201ENSMUST00000120182 631 ntBASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cldnd1Q9CQX5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Gm11452-201ENSMUST00000122376 690 ntBASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldnd1Q9CQX5 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Gm18733-201ENSMUST00000173950 856 ntBASIC17.84■□□□□ 0.45
Cldnd1Q9CQX5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms