Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Sec61bQ9CQS8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gm6598-201ENSMUST00000202719 2615 ntBASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Sec61bQ9CQS8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Gm14716-201ENSMUST00000120138 718 ntBASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 AA414768-201ENSMUST00000121924 1257 ntBASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Gm16061-201ENSMUST00000122167 857 ntBASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Sec61bQ9CQS8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm6277-202ENSMUST00000224036 2779 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm25016-201ENSMUST00000158399 131 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm23634-201ENSMUST00000175071 91 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm37744-201ENSMUST00000194616 1590 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Gm43353-201ENSMUST00000199224 1295 ntBASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Sec61bQ9CQS8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms