Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rnf138Q9CQE0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf138Q9CQE0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rnf138Q9CQE0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf138Q9CQE0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf138Q9CQE0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Gm22697-201ENSMUST00000175194 63 ntBASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Gm18101-201ENSMUST00000215769 548 ntBASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf138Q9CQE0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf138Q9CQE0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rnf138Q9CQE0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Gm7213-201ENSMUST00000215977 950 ntBASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rnf138Q9CQE0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms