Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gm25016-201ENSMUST00000158399 131 ntBASIC14.28□□□□□ -0.12
Prpf8Q99PV0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prpf8Q99PV0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prpf8Q99PV0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Prpf8Q99PV0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Gm44771-201ENSMUST00000206975 626 ntBASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Tgds-204ENSMUST00000228543 1594 ntBASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Gm13401-201ENSMUST00000117074 291 ntBASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prpf8Q99PV0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Gm7791-201ENSMUST00000219066 539 ntBASIC14.25□□□□□ -0.13
Prpf8Q99PV0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prpf8Q99PV0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prpf8Q99PV0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms