Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim16Q99PP9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim16Q99PP9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.09■□□□□ 0.33
Trim16Q99PP9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim16Q99PP9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim16Q99PP9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim16Q99PP9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.08■□□□□ 0.33
Trim16Q99PP9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim16Q99PP9 Gm12896-201ENSMUST00000118430 226 ntBASIC17.08■□□□□ 0.32
Trim16Q99PP9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.08■□□□□ 0.32
Trim16Q99PP9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim16Q99PP9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.07■□□□□ 0.32
Trim16Q99PP9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim16Q99PP9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim16Q99PP9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.06■□□□□ 0.32
Trim16Q99PP9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim16Q99PP9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim16Q99PP9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.05■□□□□ 0.32
Trim16Q99PP9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim16Q99PP9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms