Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim34aQ99PP6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm29518-201ENSMUST00000190858 372 ntBASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trim34aQ99PP6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Gm11355-201ENSMUST00000121120 306 ntBASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 AC159205.3-201ENSMUST00000224614 874 ntBASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trim34aQ99PP6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trim34aQ99PP6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trim34aQ99PP6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Trim34aQ99PP6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Trim34aQ99PP6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Gm26039-201ENSMUST00000158152 144 ntBASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Gm17808-201ENSMUST00000200859 894 ntBASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Idnk-204ENSMUST00000226010 1898 ntBASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Trim34aQ99PP6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms