Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdh15Q99PJ1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Gm10052-201ENSMUST00000168019 960 ntBASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Mir8112-201ENSMUST00000184382 131 ntBASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Gm18195-201ENSMUST00000207604 706 ntBASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Gm7729-201ENSMUST00000050143 801 ntBASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdh15Q99PJ1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdh15Q99PJ1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdh15Q99PJ1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdh15Q99PJ1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdh15Q99PJ1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdh15Q99PJ1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Gm1401-201ENSMUST00000122048 772 ntBASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdh15Q99PJ1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Gm4995-201ENSMUST00000117247 432 ntBASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdh15Q99PJ1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Gm11594-201ENSMUST00000122313 162 ntBASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdh15Q99PJ1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms