Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm44466-201ENSMUST00000200264 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm44359-201ENSMUST00000200671 138 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Gm9731-201ENSMUST00000209480 747 ntBASIC17.88■□□□□ 0.45
Cdh23Q99PF4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Gm12350-201ENSMUST00000121208 462 ntBASIC17.87■□□□□ 0.45
Cdh23Q99PF4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cdh23Q99PF4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Gm24841-201ENSMUST00000158676 357 ntBASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh23Q99PF4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Gm23935-201ENSMUST00000102303 57 ntBASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Gm24270-201ENSMUST00000102326 57 ntBASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Gm24245-201ENSMUST00000157318 57 ntBASIC17.85■□□□□ 0.45
Cdh23Q99PF4 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Cdh23Q99PF4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Gm4995-201ENSMUST00000117247 432 ntBASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Gm12895-201ENSMUST00000122214 226 ntBASIC17.84■□□□□ 0.45
Cdh23Q99PF4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh23Q99PF4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh23Q99PF4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.83■□□□□ 0.44
Cdh23Q99PF4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Mir5126-201ENSMUST00000175513 77 ntBASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh23Q99PF4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms