Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trem2Q99NH8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.8■□□□□ 0.44
Trem2Q99NH8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trem2Q99NH8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.79■□□□□ 0.44
Trem2Q99NH8 Gm4974-201ENSMUST00000209974 875 ntBASIC17.79■□□□□ 0.44
Trem2Q99NH8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.79■□□□□ 0.44
Trem2Q99NH8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trem2Q99NH8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trem2Q99NH8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trem2Q99NH8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Trem2Q99NH8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trem2Q99NH8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trem2Q99NH8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trem2Q99NH8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trem2Q99NH8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trem2Q99NH8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Trem2Q99NH8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trem2Q99NH8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trem2Q99NH8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trem2Q99NH8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trem2Q99NH8 Gm12382-201ENSMUST00000122005 922 ntBASIC17.76■□□□□ 0.43
Trem2Q99NH8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.76■□□□□ 0.43
Trem2Q99NH8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trem2Q99NH8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.76■□□□□ 0.43
Trem2Q99NH8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.75■□□□□ 0.43
Trem2Q99NH8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.75■□□□□ 0.43
Trem2Q99NH8 Gm5643-201ENSMUST00000117081 966 ntBASIC17.75■□□□□ 0.43
Trem2Q99NH8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.75■□□□□ 0.43
Trem2Q99NH8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trem2Q99NH8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Trem2Q99NH8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms