Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Gm15378-201ENSMUST00000121894 207 ntBASIC18.04■□□□□ 0.48
SncaipQ99ME3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.04■□□□□ 0.48
SncaipQ99ME3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SncaipQ99ME3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.03■□□□□ 0.48
SncaipQ99ME3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Gm22240-201ENSMUST00000175225 82 ntBASIC18.03■□□□□ 0.48
SncaipQ99ME3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.03■□□□□ 0.48
SncaipQ99ME3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaipQ99ME3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Mir8112-201ENSMUST00000184382 131 ntBASIC18.02■□□□□ 0.48
SncaipQ99ME3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaipQ99ME3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SncaipQ99ME3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SncaipQ99ME3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.01■□□□□ 0.47
SncaipQ99ME3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaipQ99ME3 Gm37519-201ENSMUST00000191687 2210 ntBASIC18■□□□□ 0.47
SncaipQ99ME3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SncaipQ99ME3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SncaipQ99ME3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18■□□□□ 0.47
SncaipQ99ME3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SncaipQ99ME3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaipQ99ME3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms