Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr3Q99MB1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tlr3Q99MB1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tlr3Q99MB1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Gm715-201ENSMUST00000117865 831 ntBASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tlr3Q99MB1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Gm37292-201ENSMUST00000192062 758 ntBASIC18.75■□□□□ 0.59
Tlr3Q99MB1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tlr3Q99MB1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Gm15378-201ENSMUST00000121894 207 ntBASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.74■□□□□ 0.59
Tlr3Q99MB1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.73■□□□□ 0.59
Tlr3Q99MB1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Gm12382-201ENSMUST00000122005 922 ntBASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 Gm43183-201ENSMUST00000200632 547 ntBASIC18.72■□□□□ 0.59
Tlr3Q99MB1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tlr3Q99MB1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms