Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Gm24589-201ENSMUST00000116692 94 ntBASIC18.45■□□□□ 0.54
Clp1Q99LI9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.45■□□□□ 0.54
Clp1Q99LI9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.45■□□□□ 0.54
Clp1Q99LI9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clp1Q99LI9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.44■□□□□ 0.54
Clp1Q99LI9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clp1Q99LI9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clp1Q99LI9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.42■□□□□ 0.54
Clp1Q99LI9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.41■□□□□ 0.54
Clp1Q99LI9 Gm34391-201ENSMUST00000203706 907 ntBASIC18.41■□□□□ 0.54
Clp1Q99LI9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.41■□□□□ 0.54
Clp1Q99LI9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.4■□□□□ 0.54
Clp1Q99LI9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clp1Q99LI9 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.39■□□□□ 0.54
Clp1Q99LI9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.39■□□□□ 0.54
Clp1Q99LI9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clp1Q99LI9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clp1Q99LI9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clp1Q99LI9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clp1Q99LI9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.39■□□□□ 0.53
Clp1Q99LI9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.39■□□□□ 0.53
Clp1Q99LI9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Olfr129-201ENSMUST00000122318 993 ntBASIC18.39■□□□□ 0.53
Clp1Q99LI9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.39■□□□□ 0.53
Clp1Q99LI9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clp1Q99LI9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.39■□□□□ 0.53
Clp1Q99LI9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms