Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm11355-201ENSMUST00000121120 306 ntBASIC20.13■□□□□ 0.81
Rfc4Q99J62 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rfc4Q99J62 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rfc4Q99J62 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Tgds-204ENSMUST00000228543 1594 ntBASIC20.12■□□□□ 0.81
Rfc4Q99J62 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rfc4Q99J62 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc4Q99J62 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.11■□□□□ 0.81
Rfc4Q99J62 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rfc4Q99J62 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rfc4Q99J62 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Gm18669-201ENSMUST00000216049 778 ntBASIC20.09■□□□□ 0.81
Rfc4Q99J62 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rfc4Q99J62 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rfc4Q99J62 Gm7461-201ENSMUST00000058918 827 ntBASIC20.08■□□□□ 0.81
Rfc4Q99J62 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfc4Q99J62 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfc4Q99J62 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rfc4Q99J62 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Rfc4Q99J62 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.07■□□□□ 0.8
Rfc4Q99J62 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.07■□□□□ 0.8
Rfc4Q99J62 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rfc4Q99J62 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rfc4Q99J62 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc4Q99J62 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rfc4Q99J62 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms