Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Gm29791-202ENSMUST00000207888 369 ntBASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Thumpd1Q99J36 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Thumpd1Q99J36 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Thumpd1Q99J36 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gm6420-201ENSMUST00000193885 723 ntBASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Thumpd1Q99J36 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.58■□□□□ 0.09
Thumpd1Q99J36 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Nespas-201ENSMUST00000143738 1083 ntBASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Thumpd1Q99J36 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.58■□□□□ 0.08
Thumpd1Q99J36 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Thumpd1Q99J36 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Thumpd1Q99J36 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms