Protein–RNA interactions for Protein: Q99J19

Smim11a, Small integral membrane protein 11A, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim11aQ99J19 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim11aQ99J19 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.15■□□□□ 0.34
Smim11aQ99J19 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Gm7291-201ENSMUST00000199147 382 ntBASIC17.15■□□□□ 0.34
Smim11aQ99J19 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.15■□□□□ 0.34
Smim11aQ99J19 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smim11aQ99J19 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Gm7290-201ENSMUST00000104990 617 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Gm12918-201ENSMUST00000120234 636 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Gm15710-201ENSMUST00000121821 636 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Mir8112-201ENSMUST00000184382 131 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Gm5075-201ENSMUST00000196916 622 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.14■□□□□ 0.33
Smim11aQ99J19 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.14■□□□□ 0.33
Smim11aQ99J19 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.13■□□□□ 0.33
Smim11aQ99J19 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Zfp783-201ENSMUST00000095946 670 ntBASIC17.13■□□□□ 0.33
Smim11aQ99J19 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim11aQ99J19 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Smim11aQ99J19 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Gm6211-202ENSMUST00000167849 925 ntBASIC17.12■□□□□ 0.33
Smim11aQ99J19 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Smim11aQ99J19 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smim11aQ99J19 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms