Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Gm10231-201ENSMUST00000181584 441 ntBASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Gm10175-202ENSMUST00000208752 441 ntBASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prdm9Q96EQ9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prdm9Q96EQ9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Gm7977-201ENSMUST00000193787 748 ntBASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prdm9Q96EQ9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Prdm9Q96EQ9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Grk6-206ENSMUST00000224995 2971 ntBASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prdm9Q96EQ9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Gm7791-201ENSMUST00000219066 539 ntBASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prdm9Q96EQ9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms