Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Gm24841-201ENSMUST00000158676 357 ntBASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha9Q91Y11 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha9Q91Y11 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.58■□□□□ 0.56
Pcdha9Q91Y11 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pcdha9Q91Y11 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha9Q91Y11 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Timm23-208ENSMUST00000226683 750 ntBASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha9Q91Y11 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdha9Q91Y11 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms