Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb1Q91Y08 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb1Q91Y08 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Gm5643-201ENSMUST00000117081 966 ntBASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Gm37292-201ENSMUST00000192062 758 ntBASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb1Q91Y08 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb1Q91Y08 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Gm12382-201ENSMUST00000122005 922 ntBASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb1Q91Y08 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb1Q91Y08 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb1Q91Y08 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb1Q91Y08 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb1Q91Y08 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms