Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.26■□□□□ 0.51
Pcdhb18Q91Y02 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb18Q91Y02 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Gm10418-201ENSMUST00000100943 576 ntBASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Gm18101-201ENSMUST00000215769 548 ntBASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Pcdhb18Q91Y02 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Gm22697-201ENSMUST00000175194 63 ntBASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb18Q91Y02 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Gm6345-202ENSMUST00000180900 204 ntBASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb18Q91Y02 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb18Q91Y02 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb18Q91Y02 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhb18Q91Y02 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb18Q91Y02 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms