Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhga9Q91XX9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhga9Q91XX9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhga9Q91XX9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhga9Q91XX9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhga9Q91XX9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga9Q91XX9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga9Q91XX9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhga9Q91XX9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga9Q91XX9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhga9Q91XX9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhga9Q91XX9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhga9Q91XX9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms