Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Gm22325-201ENSMUST00000158904 308 ntBASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhgc3Q91XX1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhgc3Q91XX1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhgc3Q91XX1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhgc3Q91XX1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhgc3Q91XX1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhgc3Q91XX1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgc3Q91XX1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms