Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Gm9987-201ENSMUST00000069768 567 ntBASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ddx41Q91VN6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ddx41Q91VN6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Gm12382-201ENSMUST00000122005 922 ntBASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ddx41Q91VN6 Gm43213-201ENSMUST00000151866 1790 ntBASIC20■□□□□ 0.79
Ddx41Q91VN6 Gm37194-201ENSMUST00000193092 3031 ntBASIC20■□□□□ 0.79
Ddx41Q91VN6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ddx41Q91VN6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Ddx41Q91VN6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Gm43799-201ENSMUST00000201845 579 ntBASIC20■□□□□ 0.79
Ddx41Q91VN6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20■□□□□ 0.79
Ddx41Q91VN6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20■□□□□ 0.79
Ddx41Q91VN6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ddx41Q91VN6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Gm11643-201ENSMUST00000119578 864 ntBASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Mir2861-201ENSMUST00000175539 82 ntBASIC19.99■□□□□ 0.79
Ddx41Q91VN6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ddx41Q91VN6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ddx41Q91VN6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Gm6433-201ENSMUST00000118634 875 ntBASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Odf3b-204ENSMUST00000227834 930 ntBASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ddx41Q91VN6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx41Q91VN6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.96■□□□□ 0.79
Ddx41Q91VN6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms