Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H1fooQ8VIK3 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Gm10418-201ENSMUST00000100943 576 ntBASIC14.65□□□□□ -0.06
H1fooQ8VIK3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H1fooQ8VIK3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
H1fooQ8VIK3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
H1fooQ8VIK3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Gm12896-201ENSMUST00000118430 226 ntBASIC14.63□□□□□ -0.07
H1fooQ8VIK3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
H1fooQ8VIK3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Mir2861-201ENSMUST00000175539 82 ntBASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H1fooQ8VIK3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Dio3-201ENSMUST00000097228 1449 ntBASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H1fooQ8VIK3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms