Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rab40cQ8VHQ4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rab40cQ8VHQ4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rab40cQ8VHQ4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rab40cQ8VHQ4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rab40cQ8VHQ4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rab40cQ8VHQ4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.27□□□□□ -0.13
Rab40cQ8VHQ4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms