Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Gm2559-201ENSMUST00000201323 363 ntBASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps4aQ8VEJ9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps4aQ8VEJ9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Gm715-201ENSMUST00000117865 831 ntBASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4aQ8VEJ9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps4aQ8VEJ9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps4aQ8VEJ9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps4aQ8VEJ9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4aQ8VEJ9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms