Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ddx39aQ8VDW0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ddx39aQ8VDW0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ddx39aQ8VDW0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Idnk-204ENSMUST00000226010 1898 ntBASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Ddx39aQ8VDW0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx39aQ8VDW0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Ddx39aQ8VDW0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx39aQ8VDW0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ddx39aQ8VDW0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Gm18032-201ENSMUST00000222541 538 ntBASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx39aQ8VDW0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx39aQ8VDW0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Gm23634-201ENSMUST00000175071 91 ntBASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx39aQ8VDW0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx39aQ8VDW0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms